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Rockefeller (Chait)
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John Aitchison
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Michael P. Rout
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Andrej Sali
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Brian Chait
Publications download as PDF´s or otherwise indicated.
John Aitchison
2006
Membranous GlomerulopathyWith Spherules: An Uncommon VariantWith Obscure Pathogenesis
2006
Pex19p Binds Pex30p and Pex32p at Regions Required for Their Peroxisomal Localization but Separate from Their Peroxisomal Targeting Signals*
2006
The Dynamin-like Protein Vps1p of the Yeast Saccharomyces cerevisiae Associates with Peroxisomes in a Pex19p-dependent Manner*
2006
Expression and functional profiling reveal distinct gene classes involved in fatty acid metabolism
2006
The Peroxisomal Membrane Protein Inp2p Is the Peroxisome-Specific Receptor for the Myosin V Motor Myo2p of Saccharomyces cerevisiae
2006
Supplement mmc1
2005
Nop53p is a novel nucleolar 60S ribosomal subunit biogenesis protein
2005
Interactions between Mad1p and the Nuclear Transport Machinery in the Yeast
Saccharomyces cerevisiae
2005
Inp1p is a peroxisomal membrane protein required for peroxisome inheritance in Saccharomyces cerevisiae
2005
The mobile nucleoporin Nup2p and chromatin-bound Prp20p function in endogenous NPC-mediated transcriptional control
2005
A data integration methodology for systems biology: Experimental verification
2005
A data integration methodology for systems biology
2005
Proteomic and genomic characterization of chromatin complexes at a boundary
Supplementary Tables
2004
Pex30p, Pex31p, and Pex32p Form a Family of Peroxisomal Integral Membrane Proteins Regulating Peroxisome Size and Number in
Saccharomyces cerevisiae
2004
POSaM: a fast, flexible, open-source, inkjet oligonucleotide synthesizer and microarrayer
2004
Characterization of Karyopherin Cargoes Reveals Unique Mechanisms of Kap121p-Mediated Nuclear Import
2004
Quantitative mass spectrometry reveals a role for the GTPase Rho1p in actin organization on the peroxisome membrane
Supplemental Material
2003
YHR150w and YDR479c encode peroxisomal integral membrane proteins involved in the regulation of peroxisome number, size, and distribution in Saccharomyces cerevisiae
2003
Pex11-related Proteins in Peroxisome Dynamics: A Role for the Novel Peroxin Pex27p in Controlling Peroxisome Size and Number in Saccharomyces cerevisiae
2003
Intersection of the Kap123p-Mediated Nuclear Import and Ribosome Export Pathways
2003
Utp8p Is an Essential Intranuclear Component of the Nuclear tRNA Export Machinery of Saccharomyces cerevisiae*
2003
Virtual gating and nuclear transport: the hole picture
2003
Systems biology and elephants
2003
Inventories to insights
2003
Cell Cycle Regulated Transport Controlled by Alterations in the Nuclear Pore Complex
2002
Approaching complete peroxisome characterization by gas-phase fractionation
2002
Karyopherins in nuclear pore biogenesis: a role for Kap121p in the assembly of Nup53p into nuclear pore complexes
2002
Kap121p-Mediated Nuclear Import Is Required for Mating and Cellular Differentiation in Yeast
2002
A Tense Time for the Nuclear Envelope
2002
Transcriptome profiling to identify genes involved in peroxisome assembly and function
2001
Co-translational Interactions of Apoprotein B with the Ribosome and Translocon during Lipoprotein Assembly or Targeting to the Proteasome*
2001
Rrb1p, a Yeast Nuclear WD-Repeat Protein Involved in the Regulation of Ribosome Biosynthesis
2001
Nup2p Dynamically Associates with the Distal Regions of the Yeast Nuclear Pore Complex
2001
A Link between the Synthesis of Nucleoporins and the Biogenesis of the Nuclear Envelope
2001
The dynamics of karyopherin-mediated nuclear transport
2001
The Nuclear Pore Complex as a Transport Machine*
2000
The Yeast Nuclear Pore Complex: Composition, Architecture, and Transport Mechanism
2000
The Road to Ribosomes: Filling Potholes in the Export Pathway
1999
Optic Flow Input to the Hippocampal Formation from the Accessory Optic System
1999
Kap104p-mediated Nuclear Import
1998
Karyopherins and kissing cousins
1998
Apoprotein B100 has a prolonged interaction with the translocon during which its lipidation and translocation change from dependence on the microsomal triglyceride transfer protein to independence
1998
Specific Binding of the Karyopherin Kap121p to a Subunit of the Nuclear Pore Complex Containing Nup53p, Nup59p, and Nup170p
1997
A Distinct Nuclear Import Pathway Used by Ribosomal Proteins
1996
Kap 104p: A Karyopherin Involved in the Nuclear Transport of mRNA Binding Proteins
1995
The Yarrowia liplytica Gene PAY2 Encodes a 42-kDa Peroxisomal Integral Membrane Protein Essential for Matrix Protein Import and Peroxisome Enlargement but Not for Peroxisome Membrane Proliferation
1995
Two Novel Related Yeast Nucleoporins Nupl70p and Nup157p: Complementation with the Vertebrate Homologue Nup155p and Functional Interactions with the Yeast Nuclear Pore-Membrane Protein Pom152p
1995
Nupl20p: A Yeast Nucleoporin Required for NPC Distribution and mRNA Transport
1994
PAY4, a Gene Requiredf or Peroxisome Assembly in the Yeast Yarrowia ZipoZytica, Encodes a Novel Membero f a Family of Putative ATPases*
1991
The Carboxyl-terminal Tripeptide Ala-Lys-Ile Is Essential for Targeting Candida tropicalis Trifunctional Enzyme to Yeast Peroxisomes*
Michael P. Rout
2006
Protease Accessibility Technical Advance Laddering: A Proteomic Tool for Probing Protein Structure
2006
Simple fold composition and modular architecture of the nuclear pore complex
2005
A Method for the Rapid and Efficient Elution of Native Affinity-Purified Protein A Tagged Complexes
2005
Fluorescent Proteins as Proteomic Probes
2005
I-DIRT, A General Method for Distinguishing between Specific and Nonspecific Protein Interactions
2005
Proteomic and genomic characterization of chromatin complexes at a boundary
2005
The nuclear pore complex–associated protein, Mlp2p, binds to the yeast spindle pole body and promotes its efficient assembly
2004
Components of Coated Vesicles and Nuclear Pore Complexes Share a Common Molecular Architecture
2004
Characterization of Karyopherin Cargoes Reveals Unique Mechanisms of Kap121p-Mediated Nuclear Import
2004
Targeted Proteomic Study of the Cyclin-Cdk Module
2004
Robbing from the pore
2003
Virtual gating and nuclear transport: the hole picture
2003
Genetic and Biochemical Evaluation of the Importance of Cdc6 in Regulating Mitotic Exit
2002
Kap121p-Mediated Nuclear Import Is Required for Mating and Cellular Differentiation in Yeast
2002
A Tense Time for the Nuclear Envelope
2002
Cleave to Leave: Structural Insights into the Dynamic Organization of the Nuclear Pore Complex
2002
Isolation of Nuclear Envelope from Saccharomyces cerevisiae
2001
Isolation and Characterization of Subnuclear Compartments from Trypanosoma brucei
2001
Composition and Functional Characterization of Yeast 66S Ribosome Assembly Intermediates
2001
Nup2p Dynamically Associates with the Distal Regions of the Yeast Nuclear Pore Complex
2001
The Nuclear Pore Complex as a Transport Machine*
2000
The Road to Ribosomes: Filling Potholes in the Export Pathway
2000
The Yeast Nuclear Pore Complex: Composition, Architecture, and Transport Mechanism
2000
Pore Relations: Nuclear Pore Complexes and Nucleocytoplasmic Exchange
1999
Proteins Connecting the Nuclear Pore Complex with the Nuclear Interior
1999
TAPping into transport
1998
Three-Dimensional Architecture of the Isolated Yeast Nuclear Pore Complex: Functional and Evolutionary Implications
1998
Karyopherins and kissing cousins
1995
Disruption of the nucleoporin gene NUP133 results in clustering of nuclear pore complexes
1995
The Essential Yeast Nucleoporin NUP159 Is Located on the Cytoplasmic Side of the Nuclear Pore Complex and Serves in Karyopherin-midiated Binding of Transport Subtrate
1995
Isolation and Characterization of Nuclear Envelopes from the Yeast Saccharomyces
1995
Two Novel Related Yeast Nucleoporins Nupl70p and Nup157p: Complementation with the Vertebrate Homologue Nup155p and Functional Interactions with the Yeast Nuclear Pore-Membrane Protein Pom152p
1995
Nupl20p: A Yeast Nucleoporin Required for NPC Distribution and mRNA Transport
1995
POM152 Is an Integral Protein of the Pore Membrane Domain of the Yeast Nuclear Envelope
1994
POM152 Is an Integral Protein of the Pore Membrane Domain of the Yeast Nuclear Envelope
1994
Pores for thought: nuclear pore complex proteins
1993
Isolation of the Yeast Nuclear Pore Complex
1992
A New Family of Yeast Nuclear Pore Complex Proteins
1992
Components of the Yeast Spindle and Spindle Pole Body
Andrej Sali
2006
Comparative Modeling of Drug Target Proteins
2006
Refinement of Protein Structures by Iterative Comparative Modeling and CryoEM Density Fitting
2006
MODBASE: a database of annotated comparative protein structure models and associated resources
2006
Variable gap penalty for protein sequence–structure alignment
2006
Simple fold composition and modular architecture of the nuclear pore complex
2005
The C-type lectin fold as an evolutionary solution for massive sequence variation
2005
Combining electron microscopy and comparative protein structure modeling
2005
New York-Structural GenomiX Research Consortium (NYSGXRC): a large scale center for the protein structure initiative
2005
The optimal size of a globular protein domain: A simple sphere-packing model
2005
Localization of protein-binding sites within families of proteins
2005
Macromolecular Assemblies Highlighted
2005
Multiple cathepsin B isoforms in schistosomula of Trichobilharzia regenti: identification, characterisation and putative role in migration and nutrition
2005
Urokinase-type plasminogen activator is a preferred substrate of the human epithelium serine protease tryptase /PRSS22
2005
LS-SNP: large-scale annotation of coding non-synonymous SNPs based on multiple information sources
2005
PIBASE: a comprehensive database of structurally defined protein interfaces
2005
Structural Characterization of Assemblies from Overall Shape and Subcomplex Compositions
2005
Finding Cures for Tropical Diseases: Is Open Source an Answer?
2005
Comparative Protein Structure Modeling
2005
IMPRO VING FUNC TIO NAL ANNO TATIO N O F NO N-SYNO NOMO US SNPs WITH INFO RMATIO N THEO RY
2005
Structural characterization of components of protein assemblies by comparative modeling and electron cryo-microscopy
2005
Detecting remotely related proteins by their interactions and sequence similarity
2004
Finding Cures for Tropical Diseases: Is Open Source an Answer?
2004
Components of Coated Vesicles and Nuclear Pore Complexes Share a Common Molecular Architecture
2004
A structural perspective on protein–protein interactions
2004
Comparative Protein Structure Modeling and its Applications to Drug Discovery
2004
High-Throughput Computational and Experimental Techniques in Structural Genomics
2004
FINDING CURES FOR TROPICAL DISEASES: IS OPEN SOURCE AN ANSWER?
2004
MODBASE, a database of annotated comparative protein structure models, and associated resources
2004
Detection of homologous proteins by an intermediate sequence search
2004
Structure determination of macromolecular complexes by experiment and computation
2004
Alignment of protein sequences by their profiles
2004
Comprehensive search for cysteine cathepsins in the human genome
2004
Structure-Based Assessment of Missense Mutations in Human BRCA1: Implications for Breast and Ovarian Cancer Predisposition
2003
ModLoop: automated modeling of loops in protein structures
2003
NIH Workshop on Structural Proteomics of Biological Complexes
2003
Modeling Protein Structure from Its Sequence
2003
The zebrafish forkhead transcription factor Foxi1 specifies epibranchial placode-derived sensory neurons
2003
Study of the Structural Dynamics of the E. coli 70S Ribosome Using Real-Space Refinement
2003
Tools for comparative protein structure modeling and analysis
2003
Comparative protein structure modeling by iterative alignment, model building and model assessment
2003
EVA: evaluation of protein structure prediction servers
2003
From words to literature in structural proteomics
2003
Comparative Protein Structure Modeling
2003
Modeling Protein Structure from Its Sequence
2002
Use of Single Point Mutations in Domain I of 2-Glycoprotein I to Determine Fine Antigenic Specificity of Antiphospholipid Autoantibodies1
2002
Comparative Protein Structure Prediction
2002
RasGRP4, a New Mast Cell-restricted Ras Guanine Nucleotidereleasing Protein with Calcium- and Diacylglycerol-binding Motifs
2002
Structural Genomics at the National Synchrotron Light Source
2002
Structural genomics: A pipeline for providing structures for the biologist
2001
Response to Paoli
1995
Kinetics of protein folding
Brian Chait
2006
Synergistic functions of SII and p300 in effecting productive activator-dependent transcription of chromatin templates
2006
A PHD finger of the largest NURF subunit couples histone H3 K4 trimethylation with chromatin remodeling
2006
Regulation of hypermutation by AID phosphorylation
2006
Protease Accessibility Technical Advance Laddering: A Proteomic Tool for Probing Protein Structure Structure
2006
Linker chains of the gigantic hemoglobin of the earthworm Lumbricus terrestris: primary structures of linkers L2, L3, and L4 and analysis of the connectivity of the disulfide bonds in linker L1
2006
Simple fold composition and modular architecture of the nuclear pore complex
2005
The mobile nucleoporin Nup2p and chromatin-bound Prp20p function in endogenous NPC-mediated transcriptional control
2005
A method for the rapid and efficient elution of native affinitypurified Protein A tagged complexes
2005
Quantitative analysis of protein phosphorylation in mouse brain by hypothesisdriven multistage mass spectrometry
2005
IDIRT, A General Method for Distinguishing between Specific and Nonspecific Protein Interactions
2005
Fluorescent proteins as proteomic probes
2005
Long-range allosteric control of cytoplasmic dynein ATPase activity by the stalk and Cterminal domains
2005
The nuclear pore complexassociated protein, Mlp2p, binds to the yeast spindle pole body and promotes its efficient assembly
2005
MED1/TRAP220 exists predominantly in a TRAP/ Mediator subpopulation enriched in RNA polymerase II and is required for ERmediated transcription
2005
Polyglutamineexpanded ataxin7 inhibits STAG histone acetylltransferase activity to produce retinal degeneration
2005
Physical association and coordinate function of the H3 K4 methyltransferase MLL1 and the H4 K16 acetyltransferase MOF
2005
Channel function is dissociated from the intrinsic kinase activity and autophosphorylation of TRPM7/CHAK1
2005
Proteomic and Genomic Characterization of Chromatin Complexes at a Boundary
2005
Nterminal Acetylation and protonation of individual hemoglobin subunits
2005
Preferential Phosphorylation of R-Domain Serine 768 Dampens Activation of CFTR Channels by PKA
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